Analisis In Silico Kandungan Senyawa Kimia Terpilih Daun Jeruju (Acanthus ilicifolius Linn.) terhadap Transporter Pompa Proton sebagai Anti Tukak Lambung
In Silico Analysis of Selected Chemical Compounds of Jeruju Leaves (Acanthus ilicifolius Linn.) to Proton Pump Transporters as Antiulcerative Agents
Abstract
Background: Gastric ulcer is one of the diseases of the digestive tract with a high
prevalence. One of the plants that has the potential as an anti-ulcer is jeruju leaves
(Acanthus ilicifolius Linn.). In silico is a research method in the field of biology
that is carried out using computer software and devices to analyze chemical
compounds against the target receptor under study.
Objective: To determine whether the content of selected chemical compounds of
jeruju leaves meets the parameters of Lipinski's rule of five and is able to be
tethered to the proton pump transporter in silico so that it has potential as an antiulcer
candidate.
Method: Prediction of biological activity using PASS online, Lipinski's rule of
five test using SwissADME, ligand and receptor preparation using Discovery
Studio Visualizer, ligand and receptor optimization using AutoDock Tools 1.5.7,
molecular docking with AutoDock Vina, validation and visualization using
Discovery Studio Visualizer. The proton pump receptor was downloaded from the
Protein Data Bank (PDB) with code 5YLV. The two and three dimensional
models were downloaded using the PubChem website. Molecular docking
parameters were assessed based on the docking score.
Results: The content of selected chemical compounds of jeruju leaves meets the
parameters of Lipinski's rule of five and is able to be tethered to the proton pump
transporter in silico as an anti-ulcer candidate.
Conclusion: The content of selected chemical compounds of jeruju leaves can be
tethered to the proton pump transporter in silico so that it has potential as an antiulcer
candidate.
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